aysam.guerler(at)gmail.com
RELEASE V3.04
 



 

Compare the structures of a pair of proteins an do a simultaneous sequence alignment or find out, if a given structure contains an intrinsic rotational symmetry.

 

Compare the structure of a protein with all proteins of the ASTRAL40 database. You may individually select and review sequential and circular permutated similarities.

 

Analyze the structural similarities provided in our all-against-all database of pairwise protein structure alignments. You may individually select and analyze every alignment.

 

 

 





Guerler and Knapp, Novel Folds and their Nonsequential Structural Analogs, Protein Science 17:8, 1374 - 1382, 2008

Kolbeck et al., Connectivity independent protein-structure alignment: a hierarchical approach, BMC Bioinformatics 7:510, 2006
© 2009. Knapp Laboratories. Free University of Berlin. Institute of Chemistry and Biochemistry. Fabeckstrasse 36A. D-14195 Germany