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Protein secondary structure prediction with SPARROW

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SPARROW download page

 

On this page the software used on the SPARROW server can be downloaded to perform predictions locally instead of using the webserver. Both SPARROW and *SPARROW are available for download and both programs require PSI-BLAST together with the nr database to generate the sequence profile used as input for the prediction process. The software can be used free of charge for academic and private purpose.


SPARROW version 1.1 release

The current release of SPARROW can be downloaded here.
The program is provided as source code that can be compiled using the Makefile contained within the archive. Once SPARROW is compiled it can be run using the run_sparrow-nn.sh shell script. For more information on the usage of the script run it with the '-h" option.


*SPARROW version 1.01 release

The current release of *SPARROW can be downloaded here.
For more information on the compilation procedure and usage of *SPARROW check the README file contained in the archive.